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CAZyme Information: MGYG000003535_00532

You are here: Home > Sequence: MGYG000003535_00532

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp004556065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp004556065
CAZyme ID MGYG000003535_00532
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
406 45185.98 7.4396
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003535 2652504 MAG Fiji Oceania
Gene Location Start: 3165;  End: 4385  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003535_00532.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 190 346 7.5e-44 0.7178217821782178

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.72e-37 197 403 126 340
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.35e-36 195 347 39 189
Amb_all domain.
pfam00544 Pec_lyase_C 3.81e-21 197 344 61 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADE83376.1 4.96e-108 21 403 42 418
QVJ81552.1 1.99e-107 21 403 42 418
AAW84045.1 6.85e-94 75 403 1 321
AEW00861.1 2.55e-44 197 398 106 309
ABG58437.1 6.91e-41 187 402 106 329

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ZSC_A 5.19e-17 171 320 65 213
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
3VMV_A 2.03e-16 197 403 104 321
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1VBL_A 2.32e-15 196 403 156 411
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
1OOC_A 4.29e-14 197 390 115 343
ChainA, Pectate lyase A [Dickeya chrysanthemi],1OOC_B Chain B, Pectate lyase A [Dickeya chrysanthemi],1PE9_A Chain A, Pectate lyase A [Dickeya chrysanthemi],1PE9_B Chain B, Pectate lyase A [Dickeya chrysanthemi]
1JRG_A 1.86e-13 197 390 115 343
ChainA, Pectate lyase [Dickeya chrysanthemi],1JRG_B Chain B, Pectate lyase [Dickeya chrysanthemi],1JTA_A Chain A, pectate lyase A [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1L969 1.61e-20 171 320 90 238
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1
Q9WYR4 2.24e-20 171 320 92 240
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
Q0CBV0 7.24e-17 197 344 115 257
Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1
Q5AVN4 1.00e-16 196 403 122 322
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
Q00645 1.34e-16 197 344 116 258
Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000359 0.998833 0.000247 0.000194 0.000180 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003535_00532.