Species | Clostridium sp900769625 | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900769625 | |||||||||||
CAZyme ID | MGYG000003550_01067 | |||||||||||
CAZy Family | CBM50 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 17311; End: 18873 Strand: + |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam01476 | LysM | 1.55e-11 | 472 | 515 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
pfam12673 | DUF3794 | 2.74e-11 | 347 | 426 | 3 | 79 | Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476. |
cd00118 | LysM | 3.73e-11 | 470 | 514 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
pfam12673 | DUF3794 | 5.44e-10 | 38 | 119 | 1 | 79 | Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476. |
smart00257 | LysM | 1.28e-09 | 471 | 514 | 1 | 44 | Lysin motif. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
APF22099.1 | 0.0 | 1 | 520 | 1 | 520 |
AXB86161.1 | 0.0 | 1 | 520 | 1 | 520 |
QCJ01630.1 | 0.0 | 1 | 520 | 1 | 520 |
ALS15726.1 | 0.0 | 1 | 520 | 1 | 520 |
QGH25244.1 | 0.0 | 1 | 520 | 1 | 520 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000044 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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