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CAZyme Information: MGYG000003573_00475

You are here: Home > Sequence: MGYG000003573_00475

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900769905
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900769905
CAZyme ID MGYG000003573_00475
CAZy Family GH54
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1100 MGYG000003573_56|CGC1 116393.01 5.1067
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003573 2177308 MAG Fiji Oceania
Gene Location Start: 7562;  End: 10864  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003573_00475.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH54 40 368 4.3e-129 0.9936708860759493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09206 ArabFuran-catal 7.50e-160 40 366 1 314
Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan.
pfam00932 LTD 7.19e-09 489 587 7 94
Lamin Tail Domain. The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies.
pfam10633 NPCBM_assoc 6.57e-05 400 468 13 77
NPCBM-associated, NEW3 domain of alpha-galactosidase. The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases. The domain is associated with the NPCBM family, pfam08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACB75541.1 0.0 1 1100 1 1097
QOY90219.1 0.0 22 990 19 1026
QHS50453.1 0.0 34 989 36 1049
AXC15854.1 0.0 34 994 38 1054
ACO33152.1 8.59e-298 61 1100 1 1075

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1WD3_A 3.02e-102 39 403 2 356
Crystalstructure of arabinofuranosidase [Aspergillus luchuensis],1WD4_A Crystal structure of arabinofuranosidase complexed with arabinose [Aspergillus luchuensis],6SXS_AAA Chain AAA, Alpha-L-arabinofuranosidase B [Aspergillus luchuensis]
6SXT_A 3.11e-102 39 403 3 357
GH54a-l-arabinofuranosidase soaked with aziridine inhibitor [Aspergillus luchuensis IFO 4308]
6SXR_A 8.13e-102 39 403 2 356
E221Qmutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside [Aspergillus luchuensis IFO 4308]
2D43_A 2.19e-101 39 403 2 356
ChainA, alpha-L-arabinofuranosidase B [Aspergillus luchuensis],2D44_A Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4WL66 1.51e-109 39 409 27 380
Probable alpha-L-arabinofuranosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=abfB PE=3 SV=1
Q92455 1.85e-107 39 409 22 374
Alpha-L-arabinofuranosidase OS=Hypocrea jecorina OX=51453 GN=abf1 PE=2 SV=1
A1CGD1 4.30e-107 40 409 28 380
Probable alpha-L-arabinofuranosidase B OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=abfB PE=3 SV=1
P48792 1.89e-106 39 409 22 374
Arabinofuranosidase/B-xylosidase OS=Trichoderma koningii OX=97093 GN=xyl1 PE=3 SV=1
O74288 9.61e-106 39 409 25 379
Alpha-L-arabinofuranosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=abfB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001173 0.998005 0.000216 0.000219 0.000185 0.000174

TMHMM  Annotations      download full data without filtering help

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