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CAZyme Information: MGYG000003642_01536
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RUG572 sp900771305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305 | |||||||||||
| CAZyme ID | MGYG000003642_01536 | |||||||||||
| CAZy Family | GH105 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 9063; End: 12596 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH105 | 85 | 397 | 2.1e-65 | 0.9156626506024096 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam16153 | DUF4861 | 2.87e-56 | 819 | 1174 | 1 | 382 | Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding. |
| pfam07470 | Glyco_hydro_88 | 3.59e-46 | 41 | 397 | 1 | 337 | Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases. |
| COG4225 | YesR | 4.20e-34 | 178 | 393 | 121 | 347 | Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| SDR67342.1 | 2.81e-111 | 10 | 400 | 9 | 383 |
| AHF15539.1 | 3.00e-111 | 29 | 401 | 28 | 376 |
| AYB33650.1 | 4.47e-111 | 19 | 401 | 19 | 377 |
| QJB39988.1 | 3.39e-110 | 31 | 400 | 32 | 377 |
| QJB33470.1 | 3.39e-110 | 31 | 400 | 32 | 377 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4WU0_A | 1.12e-19 | 172 | 396 | 110 | 355 | StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824] |
| 5NOA_A | 1.44e-19 | 191 | 347 | 158 | 321 | PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron] |
| 1NC5_A | 5.89e-18 | 124 | 406 | 87 | 373 | Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis] |
| 2GH4_A | 2.27e-17 | 124 | 406 | 77 | 363 | ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis] |
| 4Q88_A | 4.03e-16 | 191 | 347 | 141 | 304 | ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| T2KN67 | 3.83e-45 | 815 | 1177 | 27 | 395 | Uncharacterized protein P7 OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21960 PE=3 SV=2 |
| O34559 | 3.23e-17 | 124 | 406 | 87 | 373 | Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1 |
| T2KPL9 | 3.37e-17 | 119 | 352 | 96 | 331 | Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1 |
| P9WF04 | 6.36e-14 | 54 | 350 | 79 | 365 | Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1 |
| L7P9J4 | 2.03e-13 | 119 | 352 | 98 | 332 | Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000210 | 0.999158 | 0.000158 | 0.000155 | 0.000145 | 0.000136 |