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CAZyme Information: MGYG000003643_00067

You are here: Home > Sequence: MGYG000003643_00067

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species W1P29-020 sp900771325
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; W1P29-020; W1P29-020 sp900771325
CAZyme ID MGYG000003643_00067
CAZy Family CBM47
CAZyme Description Hercynine oxygenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1219 136386.34 6.4856
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003643 2426387 MAG Fiji Oceania
Gene Location Start: 8620;  End: 12279  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003643_00067.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM47 68 140 3.1e-18 0.5546875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam03781 FGE-sulfatase 3.38e-43 961 1217 6 259
Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.
pfam18582 HZS_alpha 2.23e-39 639 729 1 98
Hydrazine synthase alpha subunit middle domain. The crystal structure of hydrazine synthase multiprotein complex isolated from the anammox organism Kuenenia stuttgartiensis implies a two-step mechanism for hydrazine synthesis: a three-electron reduction of nitric oxide to hydroxylamine at the active site of the gamma-subunit and its subsequent condensation with ammonia, yielding hydrazine in the active centre of the alpha-subunit. The alpha-subunit consists of three domains: an N-terminal domain which includes a six-bladed beta-propeller, a middle domain binding a pentacoordinated c-type haem (haem alphaI) and a C-terminal domain which harbours a bis-histidine-coordinated c-type haem (haem alphaII). This entry represents the middle domain of subunit alpha of hydrazine synthase (HZS).
COG1262 YfmG 4.01e-39 961 1216 54 310
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones].
smart00607 FTP 1.12e-06 51 131 1 85
eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain.
pfam00754 F5_F8_type_C 9.99e-05 68 154 11 89
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT74006.1 2.18e-244 229 1219 326 1330
AQT69174.1 8.38e-61 213 879 139 768
ASV76038.1 1.63e-59 60 889 40 932
BBH25058.1 4.61e-31 962 1219 22 250
QJW89271.1 1.68e-29 952 1216 16 254

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5HHA_A 1.29e-21 961 1218 43 285
Structureof PvdO from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5HHA_B Structure of PvdO from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
1Y4J_A 3.29e-14 1033 1218 115 267
Crystalstructure of the paralogue of the human formylglycine generating enzyme [Homo sapiens],1Y4J_B Crystal structure of the paralogue of the human formylglycine generating enzyme [Homo sapiens]
3LE0_A 1.83e-13 52 133 10 91
ChainA, Platelet aggregation factor Sm-hPAF [Streptococcus mitis],3LEG_A Chain A, Platelet aggregation factor Sm-hPAF [Streptococcus mitis],3LEI_A Chain A, Platelet aggregation factor Sm-hPAF [Streptococcus mitis],3LEK_A Chain A, Platelet aggregation factor Sm-hPAF [Streptococcus mitis]
3CQO_A 5.35e-13 24 136 120 234
Crystalstructure of a f-lectin (fucolectin) from morone saxatilis (striped bass) serum [Morone saxatilis],3CQO_B Crystal structure of a f-lectin (fucolectin) from morone saxatilis (striped bass) serum [Morone saxatilis],3CQO_C Crystal structure of a f-lectin (fucolectin) from morone saxatilis (striped bass) serum [Morone saxatilis]
4GWI_A 6.27e-13 52 133 10 91
His62 mutant of the lectin binding domain of lectinolysin complexed with Lewis y [Streptococcus mitis],4GWJ_A His 62 mutant of the lectin binding domain of Lectinolysin complexed with Lewis b [Streptococcus mitis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q58CP2 1.25e-17 950 1214 20 289
Inactive C-alpha-formylglycine-generating enzyme 2 OS=Bos taurus OX=9913 GN=SUMF2 PE=2 SV=1
Q5RCR5 1.47e-15 950 1218 20 293
Inactive C-alpha-formylglycine-generating enzyme 2 OS=Pongo abelii OX=9601 GN=SUMF2 PE=2 SV=1
Q8NBJ7 3.60e-15 950 1218 20 293
Inactive C-alpha-formylglycine-generating enzyme 2 OS=Homo sapiens OX=9606 GN=SUMF2 PE=1 SV=2
Q8BPG6 2.35e-14 949 1214 27 296
Inactive C-alpha-formylglycine-generating enzyme 2 OS=Mus musculus OX=10090 GN=Sumf2 PE=1 SV=2
Q8R0F3 1.14e-11 961 1218 90 366
Formylglycine-generating enzyme OS=Mus musculus OX=10090 GN=Sumf1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000767 0.998346 0.000243 0.000233 0.000196 0.000202

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003643_00067.