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CAZyme Information: MGYG000003644_01311

You are here: Home > Sequence: MGYG000003644_01311

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia;
CAZyme ID MGYG000003644_01311
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
347 38430.47 4.671
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003644 2073085 MAG Fiji Oceania
Gene Location Start: 451;  End: 1494  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003644_01311.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 335 2.5e-84 0.9756944444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 8.97e-75 10 304 87 374
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02432 PLN02432 4.40e-58 4 341 11 292
putative pectinesterase
pfam01095 Pectinesterase 6.70e-48 4 303 2 260
Pectinesterase.
PLN02773 PLN02773 1.78e-47 3 343 6 304
pectinesterase
PLN02682 PLN02682 8.59e-45 4 342 71 368
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEN98064.1 1.31e-153 1 342 1 332
CBL11054.1 5.06e-150 16 342 14 365
VCV23720.1 2.05e-149 16 342 14 365
CBL08524.1 2.05e-149 16 342 14 365
ABX41678.1 5.50e-117 4 342 5 339

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 5.40e-28 5 304 4 268
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 1.38e-27 13 304 12 264
ChainA, Pectinesterase 1 [Solanum lycopersicum]
2NSP_A 1.02e-25 6 290 8 281
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 1.10e-22 3 309 34 323
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1C_A 5.99e-19 12 343 15 294
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 2.58e-36 2 343 5 304
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q43043 4.30e-36 1 304 50 319
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
Q9FM79 1.81e-35 19 341 95 378
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q8GXA1 1.07e-33 13 342 265 558
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q9SIJ9 1.51e-33 4 341 49 332
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003644_01311.