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CAZyme Information: MGYG000003656_01277
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA1417 sp003531055 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA1417; UBA1417 sp003531055 | |||||||||||
| CAZyme ID | MGYG000003656_01277 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 121406; End: 122776 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 157 | 428 | 1.5e-43 | 0.7569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 8.49e-14 | 170 | 433 | 209 | 438 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 4.15e-11 | 167 | 386 | 140 | 345 | polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 3.06e-08 | 194 | 393 | 88 | 306 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 9.08e-08 | 167 | 381 | 114 | 318 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 7.04e-05 | 166 | 431 | 140 | 438 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHW32786.1 | 1.93e-116 | 14 | 445 | 25 | 458 |
| QHT63269.1 | 3.53e-109 | 10 | 445 | 13 | 450 |
| QOY89194.1 | 2.26e-68 | 2 | 445 | 18 | 444 |
| AZN40317.1 | 1.02e-64 | 75 | 445 | 60 | 428 |
| QJC51520.1 | 1.57e-63 | 75 | 445 | 61 | 429 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P43212 | 6.17e-08 | 167 | 354 | 147 | 333 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
| P35338 | 4.85e-07 | 196 | 388 | 166 | 350 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
| Q6H9K0 | 2.43e-06 | 138 | 388 | 72 | 316 | Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1 |
| P35339 | 4.64e-06 | 196 | 388 | 166 | 350 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
| Q9SFB7 | 4.91e-06 | 166 | 270 | 159 | 274 | Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |