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CAZyme Information: MGYG000003685_01140

You are here: Home > Sequence: MGYG000003685_01140

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003438495
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003438495
CAZyme ID MGYG000003685_01140
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
866 MGYG000003685_16|CGC1 94392.65 4.5624
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003685 2282430 Isolate China Asia
Gene Location Start: 1122;  End: 3722  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003685_01140.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 859 2.2e-64 0.9635922330097088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.43e-04 411 586 579 755
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 13 866 4 855
AZH68834.1 0.0 1 861 1 863
QNM10672.1 2.34e-297 1 860 1 833
AGF57028.1 4.01e-238 6 854 5 840
APQ61832.1 9.54e-196 6 859 5 867

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999964 0.000061 0.000004 0.000000 0.000000 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003685_01140.