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CAZyme Information: MGYG000003693_00621

You are here: Home > Sequence: MGYG000003693_00621

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola plebeius_A
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola plebeius_A
CAZyme ID MGYG000003693_00621
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
752 MGYG000003693_4|CGC2 83734.3 4.1828
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003693 3967780 Isolate China Asia
Gene Location Start: 14181;  End: 16439  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 475 733 2.4e-40 0.6765676567656765

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 5.29e-27 475 732 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 8.77e-27 475 734 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 3.98e-17 482 739 126 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 3.52e-11 53 135 3 85
Glycosyl hydrolase family 10.
COG3693 XynA 2.29e-06 47 149 20 121
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRX63290.1 2.80e-288 19 738 22 731
ANU56191.1 6.76e-276 1 736 1 743
QQR18969.1 6.76e-276 1 736 1 743
AXH21505.1 3.40e-260 11 739 12 746
EDV05072.1 3.40e-260 11 739 12 746

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MGS_A 1.92e-20 152 296 1 150
BiXyn10ACBM1 APO [Bacteroides intestinalis DSM 17393]
4QPW_A 3.00e-18 162 293 5 141
BiXyn10ACBM1 with Xylohexaose Bound [Bacteroides intestinalis DSM 17393]
4XUY_A 8.51e-11 476 736 102 302
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
6LPS_A 1.61e-08 461 651 100 261
ChainA, Beta-xylanase [Halalkalibacterium halodurans]
2F8Q_A 3.80e-08 461 651 98 263
Analkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27],2F8Q_B An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O94163 2.31e-12 476 736 125 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
Q4JHP5 9.85e-12 476 736 126 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1
Q0CBM8 1.32e-11 476 736 126 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnC PE=2 SV=2
Q96VB6 7.35e-11 476 736 123 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
O59859 2.43e-10 476 736 127 327
Endo-1,4-beta-xylanase OS=Aspergillus aculeatus OX=5053 GN=xynIA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.027247 0.407719 0.564345 0.000188 0.000214 0.000274

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003693_00621.