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CAZyme Information: MGYG000003693_00872

You are here: Home > Sequence: MGYG000003693_00872

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola plebeius_A
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola plebeius_A
CAZyme ID MGYG000003693_00872
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
481 54226.05 7.8708
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003693 3967780 Isolate China Asia
Gene Location Start: 53235;  End: 54680  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003693_00872.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 197 443 1.6e-32 0.7353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.37e-04 223 322 244 344
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT42764.1 9.02e-249 8 475 6 472
QUT70389.1 9.02e-249 8 475 6 472
BCA49442.1 9.02e-249 8 475 6 472
QQA07135.1 1.28e-248 8 475 6 472
ALJ42773.1 3.62e-248 8 475 6 472

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.026994 0.830154 0.141419 0.000627 0.000367 0.000416

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003693_00872.