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CAZyme Information: MGYG000003740_00110
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ezakiella coagulans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Tissierellales; Peptoniphilaceae; Ezakiella; Ezakiella coagulans | |||||||||||
| CAZyme ID | MGYG000003740_00110 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 107708; End: 116380 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 4.32e-40 | 1541 | 2096 | 1 | 538 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4983 | COG4983 | 2.44e-33 | 5 | 274 | 6 | 276 | Uncharacterized protein, contains Primase-polymerase (Primpol) domain [Function unknown]. |
| COG4646 | COG4646 | 1.09e-28 | 2223 | 2426 | 426 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG0827 | YtxK | 8.07e-13 | 1409 | 1539 | 225 | 362 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 2.31e-11 | 2062 | 2305 | 21 | 190 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 4.79e-243 | 1260 | 2790 | 1567 | 3142 |
| QIW86704.1 | 1.26e-240 | 1260 | 2790 | 1635 | 3210 |
| QIW86628.1 | 1.26e-240 | 1260 | 2790 | 1635 | 3210 |
| AEY69616.1 | 5.19e-232 | 1260 | 2800 | 1708 | 3296 |
| AXF51455.1 | 7.12e-230 | 1260 | 2800 | 1801 | 3389 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6K9A_A | 1.00e-22 | 12 | 295 | 12 | 285 | Thecomplex of NrS-1 N terminal domain (1-305) with dGTP [Nitratiruptor phage NrS-1],6K9B_A Apo structure of NrS-1 N terminal domain N305 [Nitratiruptor phage NrS-1],6K9B_B Apo structure of NrS-1 N terminal domain N305 [Nitratiruptor phage NrS-1] |
| 6A9W_A | 1.31e-22 | 12 | 295 | 31 | 304 | Structureof the bifunctional DNA primase-polymerase from phage NrS-1 [Nitratiruptor phage NrS-1],6JON_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1],6JOP_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1],6JOQ_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1] |
| 7RR4_A | 5.80e-22 | 12 | 295 | 11 | 284 | ChainA, Primase [Nitratiruptor phage NrS-1] |
| 7RR3_A | 5.92e-22 | 12 | 295 | 11 | 284 | ChainA, Primase [Nitratiruptor phage NrS-1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 5.56e-34 | 1329 | 2613 | 87 | 1568 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| P54509 | 1.90e-07 | 2062 | 2598 | 80 | 501 | Uncharacterized ATP-dependent helicase YqhH OS=Bacillus subtilis (strain 168) OX=224308 GN=yqhH PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000051 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |