dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000003743_00352

You are here: Home > Sequence: MGYG000003743_00352

Basic Information help

Species

Lineage

Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Filifactoraceae; Filifactor;

CAZyme ID

MGYG000003743_00352

CAZy Family

GH171

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
418	MGYG000003743_32\|CGC1	46523.61	8.4419

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003743	1302624	MAG	Canada	North America

Gene Location

Start: 5666; End: 6922 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003743_00352.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH171	72	417	6.9e-107	0.9971830985915493

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07075	DUF1343	1.02e-153	73	417	1	362	Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876	YbbC	6.14e-118	47	417	21	409	Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
cd06308	PBP1_sensor_kinase-like	2.89e-04	146	227	53	113	periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.
cd06309	PBP1_galactofuranose_YtfQ-like	0.005	174	227	72	115	periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
EFE27594.2	8.12e-161	8	418	6	421
QGU96809.1	4.74e-156	54	417	12	374
CBH20341.1	1.21e-154	51	417	51	417
VEJ36366.1	7.78e-150	50	418	174	541
QYY44643.1	1.38e-143	44	417	16	386

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4K05_A	1.79e-69	51	418	12	399	Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A	1.19e-43	47	418	3	369	Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40407	9.75e-93	51	417	36	414	Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000330	0.998911	0.000218	0.000174	0.000169	0.000168

TMHMM Annotations download full data without filtering help

start	end
7	24