Species | Varibaculum massiliense | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum massiliense | |||||||||||
CAZyme ID | MGYG000003756_01240 | |||||||||||
CAZy Family | GT39 | |||||||||||
CAZyme Description | putative dolichyl-phosphate-mannose--protein mannosyltransferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 288; End: 2021 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT39 | 72 | 350 | 1.4e-63 | 0.9910313901345291 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1928 | PMT1 | 4.74e-18 | 67 | 368 | 25 | 322 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
pfam02366 | PMT | 1.26e-11 | 135 | 309 | 42 | 218 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
pfam16192 | PMT_4TMC | 2.30e-10 | 385 | 574 | 11 | 198 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
COG1807 | ArnT | 4.30e-09 | 74 | 288 | 15 | 194 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
COG4346 | COG4346 | 1.02e-05 | 138 | 499 | 136 | 405 | Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QOX81378.1 | 1.45e-140 | 57 | 577 | 41 | 547 |
QQT14111.1 | 1.16e-126 | 66 | 575 | 20 | 545 |
QQU09498.1 | 2.31e-126 | 66 | 575 | 20 | 545 |
ADI66786.1 | 2.31e-126 | 66 | 575 | 20 | 545 |
QGS11599.1 | 1.36e-116 | 50 | 577 | 57 | 581 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6P25_B | 3.99e-06 | 56 | 344 | 55 | 303 | Structureof S. cerevisiae protein O-mannosyltransferase Pmt1-Pmt2 complex bound to the sugar donor and a peptide acceptor [Saccharomyces cerevisiae W303],6P2R_B Structure of S. cerevisiae protein O-mannosyltransferase Pmt1-Pmt2 complex bound to the sugar donor [Saccharomyces cerevisiae W303] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P9WN04 | 1.15e-68 | 60 | 576 | 38 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
P9WN05 | 1.15e-68 | 60 | 576 | 38 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
L8F4Z2 | 1.07e-66 | 60 | 576 | 32 | 515 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
Q8NRZ6 | 5.20e-46 | 71 | 576 | 40 | 519 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
Q5ADM9 | 2.95e-08 | 54 | 395 | 54 | 356 | Dolichyl-phosphate-mannose--protein mannosyltransferase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PMT2 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999954 | 0.000069 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |
start | end |
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153 | 175 |
182 | 204 |
209 | 229 |
242 | 264 |
269 | 288 |
322 | 344 |
436 | 455 |
462 | 484 |
488 | 510 |
535 | 557 |
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