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CAZyme Information: MGYG000003765_00570

You are here: Home > Sequence: MGYG000003765_00570

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella bergensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella bergensis
CAZyme ID MGYG000003765_00570
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
325 37352.39 7.1599
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003765 2329044 MAG Canada North America
Gene Location Start: 1764;  End: 2741  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003765_00570.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 30 315 1.8e-102 0.9826388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 1.06e-78 29 322 7 303
pectinesterase
pfam01095 Pectinesterase 9.20e-75 31 305 4 284
Pectinesterase.
COG4677 PemB 6.66e-67 31 316 87 403
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02682 PLN02682 1.12e-63 19 324 61 369
pectinesterase family protein
PLN02432 PLN02432 2.23e-61 31 322 15 292
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS84477.1 2.11e-185 19 323 19 323
QVJ81978.1 2.46e-174 19 323 19 322
ADE82952.1 2.46e-174 19 323 19 322
AGB28242.1 1.20e-172 1 323 1 323
QJR97878.1 4.09e-165 20 325 13 320

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 1.59e-41 31 297 7 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1E_A 3.23e-39 29 294 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 1.75e-38 29 294 11 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 2.76e-38 31 297 11 281
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 3.84e-31 39 323 18 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 9.25e-60 31 302 9 283
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O23038 8.33e-48 24 322 86 388
Probable pectinesterase 8 OS=Arabidopsis thaliana OX=3702 GN=PME8 PE=2 SV=2
O80722 7.09e-47 31 298 279 553
Pectinesterase 4 OS=Arabidopsis thaliana OX=3702 GN=PME4 PE=2 SV=1
Q8VYZ3 1.95e-46 19 324 75 383
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q8GX86 2.51e-46 15 323 243 555
Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana OX=3702 GN=PME21 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000202 0.999238 0.000149 0.000148 0.000135 0.000128

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003765_00570.