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CAZyme Information: MGYG000003811_01899
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Corynebacterium amycolatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium amycolatum | |||||||||||
| CAZyme ID | MGYG000003811_01899 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 494; End: 2017 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH5 | 64 | 376 | 2e-45 | 0.9907407407407407 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam18564 | Glyco_hydro_5_C | 1.79e-13 | 418 | 504 | 2 | 86 | Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules. |
| COG2730 | BglC | 3.26e-06 | 84 | 388 | 76 | 374 | Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism]. |
| pfam02449 | Glyco_hydro_42 | 0.002 | 84 | 144 | 13 | 83 | Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQU97908.1 | 0.0 | 1 | 507 | 1 | 507 |
| AIN81622.1 | 0.0 | 1 | 507 | 13 | 519 |
| QPR30059.1 | 0.0 | 1 | 507 | 1 | 507 |
| QQB81898.1 | 0.0 | 1 | 507 | 1 | 507 |
| QQU99494.1 | 0.0 | 1 | 507 | 1 | 507 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5CCU_A | 4.57e-44 | 34 | 495 | 35 | 464 | ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5CCU_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S] |
| 5J14_A | 2.29e-43 | 34 | 495 | 35 | 464 | ChainA, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J14_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_A Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S],5J7Z_B Chain B, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S] |
| 2OSX_A | 1.50e-31 | 52 | 506 | 36 | 479 | ChainA, Endoglycoceramidase II [Rhodococcus sp.] |
| 2OSW_A | 2.79e-31 | 52 | 506 | 36 | 479 | Endo-glycoceramidaseII from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.] |
| 2OSY_A | 1.77e-30 | 52 | 506 | 36 | 479 | ChainA, Endoglycoceramidase II [Rhodococcus sp.],2OSY_B Chain B, Endoglycoceramidase II [Rhodococcus sp.] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A0A3S5YBC7 | 1.10e-42 | 35 | 495 | 29 | 456 | Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1 |
| Q6L6S1 | 2.62e-26 | 55 | 477 | 34 | 451 | Endoglycoceramidase OS=Hydra vulgaris OX=6087 PE=1 SV=1 |
| Q9GV16 | 1.65e-23 | 55 | 376 | 43 | 378 | Endoglycoceramidase OS=Cyanea nozakii OX=135523 PE=1 SV=1 |
| I1BTD7 | 2.51e-14 | 45 | 285 | 14 | 326 | Glucosylceramidase OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=ERC1 PE=1 SV=1 |
| H1AE12 | 1.90e-09 | 50 | 234 | 20 | 262 | Glucosylceramidase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=EGC1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000322 | 0.998803 | 0.000213 | 0.000231 | 0.000208 | 0.000173 |
