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CAZyme Information: MGYG000003874_00771

You are here: Home > Sequence: MGYG000003874_00771

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Merdibacter sp900759455
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelotrichaceae; Merdibacter; Merdibacter sp900759455
CAZyme ID MGYG000003874_00771
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1732 191017.03 4.0753
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003874 1971751 MAG United States North America
Gene Location Start: 48258;  End: 53456  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003874_00771.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.54e-08 1397 1521 6 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd14791 GH36 1.20e-06 643 979 6 296
glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
pfam00754 F5_F8_type_C 2.17e-06 127 243 17 116
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 4.92e-06 289 419 25 131
Substituted updates: Jan 31, 2002
pfam00754 F5_F8_type_C 3.71e-05 285 418 10 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWT17581.1 0.0 25 1595 41 1445
AQW23840.1 0.0 2 1668 8 1492
AOY54034.1 0.0 2 1668 8 1492
ABG83191.1 0.0 2 1668 8 1492
QQA11075.1 0.0 2 1668 8 1492

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4A41_A 2.78e-08 1400 1522 39 158
CpGH89CBM32-5,from Clostridium perfringens, in complex with galactose [Clostridium perfringens],4A44_A CpGH89CBM32-5, from Clostridium perfringens, in complex with the Tn Antigen [Clostridium perfringens],4A45_A CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose [Clostridium perfringens],4AAX_A CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine [Clostridium perfringens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0DTR4 9.95e-08 1397 1522 519 642
A type blood N-acetyl-alpha-D-galactosamine deacetylase OS=Flavonifractor plautii OX=292800 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000244 0.999037 0.000199 0.000163 0.000166 0.000148

TMHMM  Annotations      download full data without filtering help

start end
1703 1725