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CAZyme Information: MGYG000003878_00517

You are here: Home > Sequence: MGYG000003878_00517

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella oris
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella oris
CAZyme ID MGYG000003878_00517
CAZy Family PL29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
796 MGYG000003878_14|CGC2 88438.27 8.4382
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003878 2959023 MAG United States North America
Gene Location Start: 19883;  End: 22273  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003878_00517.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL29 66 380 6.6e-109 0.9933554817275747

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16315 DUF4955 1.47e-74 400 549 1 149
Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708 Pectate_lyase_3 1.04e-05 67 195 3 127
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEH14500.1 0.0 1 796 1 796
QDM10828.1 3.11e-200 24 549 317 832
QUT78855.1 3.11e-200 24 549 317 832
QNL40303.1 4.39e-200 24 549 317 832
AGB28564.1 4.37e-171 29 550 28 545

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000506 0.998547 0.000258 0.000246 0.000220 0.000189

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003878_00517.