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CAZyme Information: MGYG000003879_01498

You are here: Home > Sequence: MGYG000003879_01498

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Duodenibacillus;
CAZyme ID MGYG000003879_01498
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
155 17154.21 9.7861
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003879 2184827 MAG United States North America
Gene Location Start: 12;  End: 479  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003879_01498.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 2 137 3.1e-38 0.3700564971751412

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 3.50e-53 2 154 225 376
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 3.49e-40 2 154 227 380
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 2.55e-26 2 149 224 370
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
PRK14089 PRK14089 4.93e-10 35 110 230 309
lipid-A-disaccharide synthase.
PRK01021 lpxB 4.61e-06 35 140 483 596
lipid-A-disaccharide synthase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANU65980.1 4.29e-50 1 153 229 381
QQQ97139.1 4.29e-50 1 153 229 381
QDA54177.1 7.45e-42 1 151 236 387
QQS88891.1 1.55e-40 1 154 235 390
BBE09023.1 3.62e-40 1 149 237 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 2.34e-22 1 149 229 377
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 2.34e-22 1 149 229 377
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q470F0 5.98e-39 1 154 245 397
Lipid-A-disaccharide synthase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=lpxB PE=3 SV=1
Q63T25 7.38e-37 1 153 231 382
Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=lpxB PE=3 SV=1
Q39F56 1.05e-36 1 153 231 382
Lipid-A-disaccharide synthase OS=Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383) OX=482957 GN=lpxB PE=3 SV=1
Q3JR42 2.84e-36 1 153 231 382
Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain 1710b) OX=320372 GN=lpxB PE=3 SV=1
A3NAT4 2.84e-36 1 153 231 382
Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain 668) OX=320373 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000066 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003879_01498.