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CAZyme Information: MGYG000003904_01054

You are here: Home > Sequence: MGYG000003904_01054

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis;
CAZyme ID MGYG000003904_01054
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
963 106737.45 6.5964
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003904 2545601 MAG China Asia
Gene Location Start: 873;  End: 3764  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003904_01054.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 492 774 3e-29 0.7076566125290024

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 4.93e-07 448 574 9 128
Glycosyl hydrolase family 10.
COG3693 XynA 2.87e-06 489 741 72 334
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 2.57e-04 546 649 123 232
Glycosyl hydrolases family 39.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM47149.1 0.0 25 962 182 1120
AVM46276.1 2.88e-284 20 954 10 945
AVM44759.1 1.97e-137 200 955 35 768
AHF94342.1 2.72e-102 340 963 221 845
AHF90198.1 5.72e-100 340 962 199 817

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 5.17e-17 564 860 214 520
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000296 0.998996 0.000180 0.000191 0.000163 0.000150

TMHMM  Annotations      download full data without filtering help

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7 29