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CAZyme Information: MGYG000003904_02353

You are here: Home > Sequence: MGYG000003904_02353

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis;
CAZyme ID MGYG000003904_02353
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
261 30268.55 4.5344
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003904 2545601 MAG China Asia
Gene Location Start: 698;  End: 1483  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003904_02353.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 5 237 9.8e-28 0.44642857142857145

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.71e-11 22 224 114 312
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM43798.1 1.89e-133 1 258 487 744
BBH20286.1 2.04e-45 1 236 423 657
CBL12709.1 4.66e-44 1 236 470 705
VCV23259.1 1.28e-43 1 236 483 718
CBL08197.1 5.74e-43 1 236 466 701

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.996527 0.003438 0.000042 0.000008 0.000005 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003904_02353.