Species | ||||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; Borkfalkia; | |||||||||||
CAZyme ID | MGYG000003934_01229 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | DNA mismatch repair protein MutS | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 23048; End: 35839 Strand: - |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG4646 | COG4646 | 1.74e-75 | 1371 | 1900 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
pfam12960 | DUF3849 | 1.69e-36 | 3417 | 3539 | 1 | 124 | Protein of unknown function (DUF3849). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain frequently seen with DUF3848. |
COG4646 | COG4646 | 2.39e-25 | 2031 | 2234 | 427 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
COG4983 | COG4983 | 8.48e-25 | 3968 | 4228 | 9 | 268 | Uncharacterized protein, contains Primase-polymerase (Primpol) domain [Function unknown]. |
pfam01624 | MutS_I | 2.41e-21 | 264 | 351 | 2 | 90 | MutS domain I. This domain is found in proteins of the MutS family (DNA mismatch repair proteins) and is found associated with pfam00488, pfam05188, pfam05192 and pfam05190. The MutS family of proteins is named after the Salmonella typhimurium MutS protein involved in mismatch repair; other members of the family included the eukaryotic MSH 1,2,3, 4,5 and 6 proteins. These have various roles in DNA repair and recombination. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein. The aligned region corresponds with globular domain I, which is involved in DNA binding, in Thermus aquaticus MutS as characterized in. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ASV45029.1 | 2.07e-297 | 1076 | 2609 | 1553 | 3155 |
QIW86704.1 | 4.21e-295 | 1076 | 2609 | 1621 | 3223 |
QIW86628.1 | 4.21e-295 | 1076 | 2609 | 1621 | 3223 |
AXF51455.1 | 6.71e-279 | 1081 | 2604 | 1792 | 3387 |
AEY69616.1 | 2.40e-278 | 1081 | 2604 | 1699 | 3294 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
7RR4_A | 7.33e-18 | 3978 | 4239 | 17 | 271 | ChainA, Primase [Nitratiruptor phage NrS-1] |
6K9A_A | 2.44e-17 | 3978 | 4239 | 18 | 272 | Thecomplex of NrS-1 N terminal domain (1-305) with dGTP [Nitratiruptor phage NrS-1],6K9B_A Apo structure of NrS-1 N terminal domain N305 [Nitratiruptor phage NrS-1],6K9B_B Apo structure of NrS-1 N terminal domain N305 [Nitratiruptor phage NrS-1] |
6A9W_A | 3.04e-17 | 3978 | 4239 | 37 | 291 | Structureof the bifunctional DNA primase-polymerase from phage NrS-1 [Nitratiruptor phage NrS-1],6JON_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1],6JOP_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1],6JOQ_A Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity [Nitratiruptor phage NrS-1] |
7RR3_A | 1.20e-15 | 3978 | 4239 | 17 | 271 | ChainA, Primase [Nitratiruptor phage NrS-1] |
5AKB_A | 1.28e-10 | 263 | 350 | 11 | 99 | MutSin complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKB_B MutS in complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKB_E MutS in complex with the N-terminal domain of MutL - crystal form 1 [Escherichia coli K-12],5AKC_A MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_B MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_E MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_F MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_I MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKC_J MutS in complex with the N-terminal domain of MutL - crystal form 2 [Escherichia coli K-12],5AKD_A MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_B MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_E MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_F MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_I MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12],5AKD_J MutS in complex with the N-terminal domain of MutL - crystal form 3 [Escherichia coli K-12] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q71TF8 | 9.24e-43 | 1084 | 2427 | 45 | 1567 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
A4J5Q6 | 9.43e-18 | 262 | 351 | 3 | 93 | DNA mismatch repair protein MutS OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=mutS PE=3 SV=1 |
A0Q0M6 | 1.30e-15 | 262 | 350 | 3 | 92 | DNA mismatch repair protein MutS OS=Clostridium novyi (strain NT) OX=386415 GN=mutS PE=3 SV=1 |
C5D9H5 | 4.82e-15 | 263 | 351 | 5 | 94 | DNA mismatch repair protein MutS OS=Geobacillus sp. (strain WCH70) OX=471223 GN=mutS PE=3 SV=1 |
Q3A4F1 | 4.87e-15 | 262 | 353 | 4 | 96 | DNA mismatch repair protein MutS OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=mutS PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000059 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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