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CAZyme Information: MGYG000003957_01214

You are here: Home > Sequence: MGYG000003957_01214

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp014287585
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp014287585
CAZyme ID MGYG000003957_01214
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
936 MGYG000003957_18|CGC1 105610.46 5.5008
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003957 4724401 MAG United Kingdom Europe
Gene Location Start: 2868;  End: 5678  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003957_01214.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 23 488 1.9e-70 0.4946808510638298

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.26e-24 24 547 9 509
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 5.06e-20 23 473 8 443
beta-D-glucuronidase; Provisional
PRK10340 ebgA 5.71e-20 22 473 36 470
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 7.94e-19 29 379 54 408
beta-galactosidase.
pfam02837 Glyco_hydro_2_N 1.22e-14 29 220 3 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75482.1 0.0 5 936 3 934
QRO25183.1 0.0 12 932 10 927
SDS50045.1 0.0 14 936 14 948
SCD20884.1 0.0 19 933 16 938
ATP55310.1 0.0 28 932 31 948

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DYO_A 2.07e-24 29 480 53 489
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYO_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYO_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYO_D Chain D, Beta-galactosidase [Escherichia coli K-12],3DYP_A Chain A, Beta-galactosidase [Escherichia coli K-12],3DYP_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYP_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYP_D Chain D, Beta-galactosidase [Escherichia coli K-12]
1F4A_A 3.58e-24 29 480 51 487
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]
5A1A_A 3.58e-24 29 480 52 488
2.2A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_B 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_C 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12],5A1A_D 2.2 A resolution cryo-EM structure of beta-galactosidase in complex with a cell-permeant inhibitor [Escherichia coli K-12]
3MUY_1 3.59e-24 29 480 53 489
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]
3J7H_A 3.59e-24 29 480 54 490
Structureof beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_B Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_C Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_D Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],4CKD_A Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_B Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_C Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_D Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],6DRV_A Beta-galactosidase [Escherichia coli K-12],6DRV_B Beta-galactosidase [Escherichia coli K-12],6DRV_C Beta-galactosidase [Escherichia coli K-12],6DRV_D Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7ZWZ1 6.56e-24 29 480 54 490
Beta-galactosidase OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=lacZ PE=3 SV=1
A7ZI91 6.56e-24 29 480 54 490
Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=lacZ PE=3 SV=1
Q32JB6 1.49e-23 29 480 54 490
Beta-galactosidase OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=lacZ PE=3 SV=2
P00722 1.96e-23 29 480 54 490
Beta-galactosidase OS=Escherichia coli (strain K12) OX=83333 GN=lacZ PE=1 SV=2
A7KGA5 1.96e-23 29 480 54 490
Beta-galactosidase OS=Klebsiella pneumoniae OX=573 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000171 0.160478 0.839158 0.000058 0.000068 0.000062

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003957_01214.