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CAZyme Information: MGYG000003958_01828

You are here: Home > Sequence: MGYG000003958_01828

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900545715
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900545715
CAZyme ID MGYG000003958_01828
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
617 MGYG000003958_9|CGC1 68690.93 9.3697
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003958 2427590 MAG United Kingdom Europe
Gene Location Start: 41244;  End: 43097  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003958_01828.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 71 250 6.6e-29 0.4872389791183295

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 9.14e-07 60 195 65 218
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 2.15e-06 64 176 46 167
Glycosyl hydrolase family 10.
pfam01229 Glyco_hydro_39 7.84e-05 109 243 122 270
Glycosyl hydrolases family 39.
COG5309 Scw11 1.74e-04 165 265 165 265
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
smart00633 Glyco_10 8.37e-04 64 138 3 86
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 3.15e-193 27 604 28 603
QDU57372.1 1.04e-89 25 567 27 576
AVM44901.1 3.47e-60 27 534 26 549
AHF90941.1 2.64e-38 27 566 233 802
SEH85923.1 1.55e-33 40 250 55 279

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 1.66e-12 4 261 83 358
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
I1S3C6 7.24e-07 51 174 112 243
Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000388 0.998634 0.000422 0.000189 0.000176 0.000175

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003958_01828.