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CAZyme Information: MGYG000003999_00397

You are here: Home > Sequence: MGYG000003999_00397

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; CAG-521;
CAZyme ID MGYG000003999_00397
CAZy Family GH23
CAZyme Description Cell division suppressor protein YneA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
506 MGYG000003999_3|CGC1 57092.68 10.3478
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003999 1640178 MAG United Kingdom Europe
Gene Location Start: 64501;  End: 66021  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003999_00397.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 101 238 1.1e-23 0.8888888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10783 mltD 2.62e-100 51 452 54 450
membrane-bound lytic murein transglycosylase D; Provisional
cd16894 MltD-like 1.10e-59 110 237 2 128
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
pfam01464 SLT 5.08e-27 104 212 1 110
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK06347 PRK06347 2.16e-19 316 504 319 523
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 2.28e-19 323 504 393 591
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBF22593.1 3.24e-161 55 505 45 505
QQS89247.1 4.92e-161 58 505 67 527
QDA55156.1 6.22e-156 2 505 6 521
ANU65188.1 7.25e-142 58 504 43 506
QQQ96345.1 7.25e-142 58 504 43 506

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0AEZ8 2.05e-68 51 451 51 445
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1
P0AEZ7 2.05e-68 51 451 51 445
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1
P32820 5.10e-31 91 217 15 142
Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1
Q49UX4 5.41e-12 332 504 27 193
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1
O07532 2.61e-10 333 504 175 350
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.010847 0.987425 0.000807 0.000324 0.000272 0.000273

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003999_00397.