dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004006_02247

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Basic Information help

Species

Alistipes sp000434235

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp000434235

CAZyme ID

MGYG000004006_02247

CAZy Family

GH2

CAZyme Description

Evolved beta-galactosidase subunit alpha

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
434		48442.58	6.6077

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004006	2755781	MAG	United Kingdom	Europe

Gene Location

Start: 28616; End: 29920 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004006_02247.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	66	420	1.3e-40	0.42154255319148937

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10340	ebgA	4.01e-32	71	420	117	476	cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250	LacZ	6.60e-26	52	434	87	446	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525	lacZ	2.56e-16	67	423	124	491	beta-galactosidase.
pfam02836	Glyco_hydro_2_C	6.79e-12	277	423	4	165	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837	Glyco_hydro_2_N	7.11e-08	67	158	69	157	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBL07296.1	1.11e-215	1	430	1	429
CBK63719.1	1.20e-205	1	430	1	429
AFL78889.1	1.47e-197	1	431	1	432
BBL10753.1	8.75e-192	1	431	1	432
BBL07962.1	8.75e-192	1	431	1	432

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3DEC_A	3.67e-28	63	428	122	495	ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3CZJ_A	4.76e-22	67	423	123	490	ChainA, Beta-galactosidase [Escherichia coli K-12],3CZJ_B Chain B, Beta-galactosidase [Escherichia coli K-12],3CZJ_C Chain C, Beta-galactosidase [Escherichia coli K-12],3CZJ_D Chain D, Beta-galactosidase [Escherichia coli K-12]
3VDA_A	4.82e-22	67	423	152	519	E.coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_B E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_C E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_D E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDB_A E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_B E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_C E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_D E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDC_A E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_B E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_C E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_D E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli]
3VD5_A	1.54e-21	67	423	152	519	E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]
3MUY_1	2.03e-21	67	423	123	490	Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B7N8Q1	1.09e-21	67	430	124	499	Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1
B1LIM9	1.09e-21	67	423	124	491	Beta-galactosidase OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=lacZ PE=3 SV=1
B1J0T5	6.24e-21	67	423	124	491	Beta-galactosidase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=lacZ PE=3 SV=1
Q0TKT1	8.34e-21	67	423	124	491	Beta-galactosidase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=lacZ PE=3 SV=1
A7ZWZ1	8.34e-21	67	423	124	491	Beta-galactosidase OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001880	0.971962	0.025257	0.000335	0.000271	0.000250

TMHMM Annotations help

There is no transmembrane helices in MGYG000004006_02247.