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CAZyme Information: MGYG000004009_00919

You are here: Home > Sequence: MGYG000004009_00919

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004009_00919
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
457 MGYG000004009_13|CGC1 50269.41 7.4842
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004009 2059820 MAG United Kingdom Europe
Gene Location Start: 42243;  End: 43616  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004009_00919.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 78 444 3.1e-77 0.9569230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.85e-67 47 357 78 392
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 1.89e-20 48 430 21 363
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 4.45e-19 204 429 85 308
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 1.74e-16 31 437 45 421
polygalacturonase ADPG
PLN02793 PLN02793 2.82e-14 53 433 55 405
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY35504.1 1.91e-227 30 454 27 451
AND21958.1 1.34e-220 30 454 8 432
AII62903.1 2.98e-220 30 454 30 454
QUT83816.1 2.98e-220 30 454 30 454
QJR67967.1 2.98e-220 30 454 30 454

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 9.10e-89 35 431 12 417
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.84e-82 47 431 41 432
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 4.33e-37 40 424 52 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 6.48e-17 207 413 25 249
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P15922 7.41e-17 29 426 131 556
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P48978 3.81e-14 35 429 83 443
Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1
Q873X6 1.82e-09 82 329 84 309
Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000277 0.999074 0.000171 0.000162 0.000149 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004009_00919.