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CAZyme Information: MGYG000004020_01307

You are here: Home > Sequence: MGYG000004020_01307

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; Borkfalkia;
CAZyme ID MGYG000004020_01307
CAZy Family GT111
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
570 MGYG000004020_22|CGC1 64911.21 8.2086
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004020 1898943 MAG United Kingdom Europe
Gene Location Start: 5059;  End: 6771  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004020_01307.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT111 7 235 4.6e-67 0.9861751152073732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14393 DUF4422 5.63e-88 6 236 1 218
Domain of unknown function (DUF4422). This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 255 and 371 amino acids in length.
cd04194 GT8_A4GalT_like 0.002 264 384 11 126
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWY98505.1 2.87e-117 3 504 4 519
VEJ05100.1 1.37e-55 4 241 9 266
ALN43873.1 1.37e-55 4 241 9 266
VEI94125.1 1.37e-55 4 241 9 266
ASQ29972.1 7.17e-55 2 384 28 443

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6U4B_A 3.37e-41 1 324 25 368
ChainA, WbbM protein [Klebsiella pneumoniae]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000049 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004020_01307.