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CAZyme Information: MGYG000004021_01183
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA11471 sp900542765 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900542765 | |||||||||||
| CAZyme ID | MGYG000004021_01183 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 36998; End: 39097 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 75 | 261 | 1.6e-77 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam18884 | TSP3_bac | 7.49e-05 | 439 | 460 | 1 | 22 | Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues. |
| COG3866 | PelB | 1.78e-04 | 24 | 381 | 29 | 341 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 0.003 | 69 | 261 | 3 | 186 | Amb_all domain. |
| NF033506 | PACE-CTERM-PROT | 0.006 | 462 | 580 | 244 | 385 | putative S-layer protein. Assembled genomes from the Candidatus Pacearchaeota archaeon group and its close relatives, so far all uncultured, have a single archaeosortase, called pacearchaseosortase. A search protein archaeosortase targets, with a C-terminal domain resembling other archaeosortase and exosortase sorting signal regions, found this family as the best candidate. It is nearly always encoded by a gene found adjacent to the pacearchaseosortase gene. This dedicated arrangement, a sorting enzyme encoded next to its only predicted sorting substrate, suggests that members of this family, called PACE-CTERM, may be an important and abundant surface protein, most likely the major S-layer protein. |
| pfam00544 | Pec_lyase_C | 0.008 | 113 | 218 | 58 | 175 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT75603.1 | 3.12e-199 | 6 | 508 | 1 | 511 |
| QUT77823.1 | 4.24e-196 | 22 | 487 | 50 | 520 |
| QUT93111.1 | 2.98e-195 | 21 | 482 | 41 | 511 |
| ALJ61309.1 | 3.42e-195 | 21 | 482 | 45 | 515 |
| QQR08040.1 | 4.63e-195 | 3 | 648 | 8 | 653 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8NQQ7 | 1.50e-53 | 23 | 482 | 20 | 414 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q2UB83 | 2.76e-52 | 23 | 482 | 20 | 414 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| Q5B297 | 3.45e-49 | 4 | 482 | 6 | 411 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 1.54e-47 | 23 | 482 | 20 | 414 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| B0XMA2 | 2.01e-46 | 23 | 482 | 21 | 415 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000227 | 0.999110 | 0.000208 | 0.000154 | 0.000147 | 0.000134 |