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CAZyme Information: MGYG000004034_01764

You are here: Home > Sequence: MGYG000004034_01764

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-138; UBA1685;
CAZyme ID MGYG000004034_01764
CAZy Family GT39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1247 139291.76 4.9333
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004034 2328311 MAG United Kingdom Europe
Gene Location Start: 1257;  End: 5000  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004034_01764.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT39 831 1054 2e-55 0.9192825112107623

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16192 PMT_4TMC 5.16e-28 1064 1240 1 198
C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes.
COG1928 PMT1 3.90e-22 1070 1244 505 695
Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].
COG5542 COG5542 1.63e-15 284 598 81 377
Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism].
pfam02366 PMT 5.68e-14 829 1048 16 234
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.
COG4346 COG4346 9.39e-13 855 1145 132 364
Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASA25569.1 4.11e-253 4 1244 3 1268
QWU18200.1 1.33e-252 3 1244 2 1273
AIQ11159.1 1.33e-252 3 1244 2 1273
QGQ95357.1 4.41e-252 24 1244 32 1279
QSF45552.1 1.04e-251 12 1244 12 1273

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
L8F4Z2 3.83e-29 836 1242 67 515
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1
P9WN04 3.21e-26 836 1242 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2
P9WN05 3.21e-26 836 1242 73 521
Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000826 0.648613 0.349680 0.000315 0.000288 0.000263

TMHMM  Annotations      download full data without filtering help

start end
208 230
245 267
287 309
324 346
359 381
386 403
408 430
445 467
480 502
517 539
546 565
569 584
589 611
621 643
687 709
878 900
929 951
966 1000
1032 1054
1115 1137
1150 1167
1172 1191
1204 1226