You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004050_00923
You are here: Home > Sequence: MGYG000004050_00923
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; | |||||||||||
| CAZyme ID | MGYG000004050_00923 | |||||||||||
| CAZy Family | PL10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 11130; End: 13271 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL10 | 58 | 347 | 8.1e-110 | 0.9895833333333334 |
| CE8 | 402 | 636 | 4.2e-28 | 0.7708333333333334 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam09492 | Pec_lyase | 5.48e-139 | 58 | 349 | 1 | 288 | Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. |
| TIGR02474 | pec_lyase | 6.73e-110 | 58 | 346 | 1 | 286 | pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| COG4677 | PemB | 8.73e-11 | 392 | 639 | 79 | 357 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 3.86e-10 | 395 | 616 | 1 | 218 | Pectinesterase. |
| PLN02432 | PLN02432 | 5.84e-07 | 404 | 577 | 26 | 178 | putative pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ALJ61703.1 | 0.0 | 3 | 713 | 7 | 707 |
| QUT92735.1 | 0.0 | 3 | 712 | 7 | 706 |
| ADY37490.1 | 0.0 | 1 | 713 | 8 | 708 |
| QJR78975.1 | 0.0 | 40 | 713 | 49 | 713 |
| QJR66036.1 | 0.0 | 40 | 713 | 49 | 713 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1R76_A | 1.02e-56 | 27 | 356 | 61 | 404 | ChainA, pectate lyase [Niveispirillum irakense] |
| 1GXM_A | 4.92e-55 | 51 | 341 | 37 | 314 | Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus] |
| 1GXO_A | 6.66e-54 | 51 | 341 | 37 | 314 | MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus] |
| 2NSP_A | 1.90e-08 | 394 | 693 | 4 | 338 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 2NTB_A | 2.46e-07 | 394 | 693 | 4 | 338 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A8 | 3.61e-07 | 380 | 693 | 14 | 362 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| P0C1A9 | 8.43e-07 | 380 | 693 | 14 | 362 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000438 | 0.998531 | 0.000379 | 0.000243 | 0.000204 | 0.000170 |