logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004053_00655

You are here: Home > Sequence: MGYG000004053_00655

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312;
CAZyme ID MGYG000004053_00655
CAZy Family GH10
CAZyme Description Anti-sigma-I factor RsgI6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
469 54627.57 8.0833
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004053 2223892 MAG United Kingdom Europe
Gene Location Start: 22394;  End: 23803  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004053_00655.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 109 407 6.1e-42 0.9075907590759076

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.48e-36 132 407 3 260
Glycosyl hydrolase family 10.
COG3693 XynA 2.36e-29 132 410 69 337
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 2.23e-23 113 407 25 305
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW04636.1 3.19e-129 26 468 18 457
QNL52536.1 3.94e-116 31 453 16 421
AEI51978.1 4.09e-109 21 459 10 431
QHV94149.1 8.97e-109 16 460 5 436
QIP12711.1 5.06e-108 24 460 13 436

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FHE_A 6.90e-21 111 410 34 338
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
7D88_A 2.31e-20 79 442 77 395
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 5.92e-19 79 442 77 395
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
4L4O_A 2.67e-16 115 413 36 338
Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725]
4PMD_A 1.47e-15 115 413 36 338
Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 2.92e-26 73 461 405 750
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
A0A1P8AWH8 1.48e-16 54 451 572 922
Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1
F4JG10 1.26e-15 54 442 377 721
Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1
P40944 1.05e-12 158 417 415 684
Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor sp. (strain Rt8B.4) OX=28238 GN=xynA PE=3 SV=1
P07528 1.26e-09 135 382 102 357
Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000233 0.999128 0.000161 0.000168 0.000160 0.000144

TMHMM  Annotations      download full data without filtering help

start end
7 26