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CAZyme Information: MGYG000004057_00142
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; | |||||||||||
| CAZyme ID | MGYG000004057_00142 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 142; End: 2874 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 319 | 803 | 4.4e-120 | 0.9904306220095693 |
| CBM4 | 41 | 184 | 3.8e-26 | 0.9761904761904762 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 2.59e-86 | 322 | 804 | 2 | 374 | Glycosyl hydrolase family 9. |
| cd02850 | E_set_Cellulase_N | 1.96e-24 | 229 | 313 | 2 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
| pfam02927 | CelD_N | 3.99e-22 | 228 | 308 | 2 | 83 | Cellulase N-terminal ig-like domain. |
| PLN03009 | PLN03009 | 2.47e-08 | 319 | 733 | 29 | 414 | cellulase |
| PLN02909 | PLN02909 | 7.24e-08 | 377 | 758 | 75 | 453 | Endoglucanase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADU21576.1 | 0.0 | 4 | 908 | 2 | 900 |
| CBL17684.1 | 3.65e-278 | 2 | 810 | 4 | 861 |
| ADU22927.1 | 1.54e-250 | 1 | 813 | 1 | 904 |
| CAS03458.1 | 5.60e-250 | 5 | 810 | 3 | 905 |
| AAR01216.1 | 2.79e-249 | 7 | 810 | 1 | 901 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1UT9_A | 8.93e-169 | 229 | 809 | 7 | 606 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 1RQ5_A | 1.45e-167 | 229 | 810 | 7 | 607 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 6DHT_A | 2.75e-73 | 229 | 804 | 18 | 561 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 3X17_A | 1.70e-68 | 229 | 808 | 18 | 557 | Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium] |
| 4CJ0_A | 4.13e-62 | 229 | 806 | 30 | 547 | ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DCH1 | 2.63e-190 | 36 | 806 | 38 | 810 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| P0C2S1 | 2.63e-190 | 4 | 806 | 3 | 810 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| Q05156 | 8.05e-150 | 6 | 810 | 2 | 745 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P14090 | 4.18e-146 | 41 | 810 | 185 | 910 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
| P10476 | 1.92e-137 | 232 | 806 | 40 | 597 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.040945 | 0.913346 | 0.023019 | 0.021820 | 0.000560 | 0.000271 |
