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CAZyme Information: MGYG000004072_00526

You are here: Home > Sequence: MGYG000004072_00526

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1540 sp900552775
Lineage Bacteria; Firmicutes_A; Clostridia; UMGS1883; UMGS1883; UMGS1540; UMGS1540 sp900552775
CAZyme ID MGYG000004072_00526
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
797 89520.55 4.9434
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004072 2483861 MAG United Kingdom Europe
Gene Location Start: 334686;  End: 337079  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004072_00526.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 408 573 9.3e-43 0.9553072625698324

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 1.73e-04 49 187 137 290
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 0.003 407 561 25 181
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALS27107.1 2.90e-128 28 721 678 1371
QNK58643.1 1.99e-123 36 729 781 1479
QNN22226.1 3.49e-123 18 640 2 607
QEH43197.1 3.28e-111 50 620 34 600
QNK56587.1 2.79e-110 22 786 196 961

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 1.64e-11 49 546 139 661
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 2.83e-11 49 546 139 661
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000236 0.999100 0.000179 0.000166 0.000155 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004072_00526.