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CAZyme Information: MGYG000004072_01078
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1540 sp900552775 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; UMGS1883; UMGS1883; UMGS1540; UMGS1540 sp900552775 | |||||||||||
| CAZyme ID | MGYG000004072_01078 | |||||||||||
| CAZy Family | PL35 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 119848; End: 124227 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL35 | 980 | 1152 | 3.6e-44 | 0.9608938547486033 |
| CBM32 | 1336 | 1456 | 2.8e-18 | 0.9596774193548387 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 5.44e-17 | 1338 | 1455 | 1 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam16332 | DUF4962 | 9.26e-11 | 620 | 760 | 135 | 288 | Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown. |
| smart00231 | FA58C | 1.71e-07 | 1338 | 1458 | 13 | 137 | Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes. |
| cd00057 | FA58C | 1.43e-05 | 1322 | 1440 | 1 | 127 | Substituted updates: Jan 31, 2002 |
| pfam07940 | Hepar_II_III | 1.02e-04 | 985 | 1157 | 29 | 197 | Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUH30172.1 | 6.29e-107 | 606 | 1459 | 57 | 894 |
| AZS17848.1 | 9.94e-100 | 352 | 1459 | 165 | 1278 |
| ALS27107.1 | 1.43e-97 | 604 | 1458 | 681 | 1511 |
| QNK58643.1 | 1.37e-93 | 604 | 1458 | 776 | 1609 |
| AYB44936.1 | 1.36e-91 | 604 | 1458 | 461 | 1295 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5ZU6_A | 2.14e-14 | 1327 | 1453 | 26 | 152 | ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio] |
| 7D29_A | 3.14e-14 | 1332 | 1458 | 7 | 132 | CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2] |
| 5ZU5_A | 9.36e-13 | 1327 | 1453 | 26 | 152 | Crystalstructure of a full length alginate lyase with CBM domain [Vibrio splendidus] |
| 5XNR_A | 1.31e-12 | 1332 | 1458 | 7 | 132 | TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000271 | 0.999065 | 0.000190 | 0.000162 | 0.000156 | 0.000138 |
