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CAZyme Information: MGYG000004075_00047

You are here: Home > Sequence: MGYG000004075_00047

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004075_00047
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
497 MGYG000004075_1|CGC2 54295.04 4.6202
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004075 2841804 MAG United Kingdom Europe
Gene Location Start: 46117;  End: 47610  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004075_00047.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 210 476 4.7e-44 0.76

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.16e-12 95 371 77 366
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 5.43e-12 188 479 12 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.69e-05 211 404 128 311
polygalacturonase
PLN03003 PLN03003 8.34e-04 215 331 106 221
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACI19833.1 2.73e-126 29 497 14 484
ABX43664.1 5.66e-125 65 485 82 505
ACK41503.1 3.38e-124 49 494 34 481
BCK00431.1 1.09e-119 65 489 84 511
QTE67472.1 2.27e-110 50 495 35 485

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000010 0.000019 0.000000 0.000000 0.000000 0.000002

TMHMM  Annotations      download full data without filtering help

start end
12 34