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CAZyme Information: MGYG000004105_00771

You are here: Home > Sequence: MGYG000004105_00771

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900546005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900546005
CAZyme ID MGYG000004105_00771
CAZy Family GH127
CAZyme Description Non-reducing end beta-L-arabinofuranosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
642 MGYG000004105_3|CGC3 72540.67 5.4798
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004105 2464466 MAG United Kingdom Europe
Gene Location Start: 216492;  End: 218420  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004105_00771.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH127 36 545 1.5e-144 0.9961832061068703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3533 COG3533 1.14e-130 93 622 70 588
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944 Glyco_hydro_127 6.63e-129 35 545 1 502
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
cd04791 LanC_SerThrkinase 2.68e-05 168 295 94 230
Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNN24698.1 3.04e-131 1 627 1 653
QEC63214.1 3.42e-128 1 627 1 662
QOY86391.1 8.43e-128 26 619 26 652
AEV97381.1 2.01e-127 2 628 4 665
ASV74087.1 5.14e-127 27 621 34 628

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EX6_A 3.27e-108 26 619 5 623
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A 6.72e-103 33 622 13 648
Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A 3.22e-99 33 622 13 648
Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A 2.49e-75 39 619 47 694
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
3WRE_A 1.15e-71 35 582 2 606
Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH8 6.32e-71 35 582 2 606
Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002132 0.904402 0.092645 0.000298 0.000256 0.000248

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004105_00771.