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CAZyme Information: MGYG000004122_00869

You are here: Home > Sequence: MGYG000004122_00869

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Butyricicoccaceae; AM07-15;
CAZyme ID MGYG000004122_00869
CAZy Family CBM54
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1643 176061.75 4.2181
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004122 2305266 MAG United Kingdom Europe
Gene Location Start: 5363;  End: 10294  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004122_00869.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM54 197 312 4e-20 0.956140350877193

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00395 SLH 2.08e-09 151 193 1 42
S-layer homology domain.
NF033190 inl_like_NEAT_1 9.95e-09 44 201 595 752
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190 inl_like_NEAT_1 1.07e-07 88 216 580 716
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 4.31e-05 90 131 1 42
S-layer homology domain.
pfam00395 SLH 2.23e-04 42 72 12 42
S-layer homology domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR07714.1 0.0 8 1525 7 1496
QIA32369.1 0.0 8 1525 7 1496
BCK84769.1 0.0 6 1623 9 1621
QQR30851.1 2.64e-245 11 1529 10 1674
ASB41592.1 2.64e-245 11 1529 10 1674

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GZT_A 7.69e-09 199 268 37 108
CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]
6BT4_A 7.49e-08 44 197 39 192
Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A 7.61e-08 44 197 18 171
Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38536 5.20e-19 44 197 1694 1851
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38537 8.46e-16 5 201 2 206
Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
Q06852 3.37e-12 53 201 2104 2264
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
P19424 1.32e-11 42 197 52 210
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
C6CRV0 4.55e-11 44 197 1296 1455
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000276 0.999029 0.000181 0.000187 0.000166 0.000146

TMHMM  Annotations      download full data without filtering help

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