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CAZyme Information: MGYG000004132_01601
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | V9D3004 sp900760345 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; V9D3004 sp900760345 | |||||||||||
| CAZyme ID | MGYG000004132_01601 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 14609; End: 15574 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 4 | 320 | 1.6e-100 | 0.9900990099009901 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 8.06e-103 | 4 | 320 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 1.68e-93 | 43 | 318 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.64e-82 | 9 | 321 | 30 | 340 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZP05644.1 | 5.21e-114 | 4 | 320 | 3 | 325 |
| ABX43367.1 | 2.54e-110 | 4 | 320 | 4 | 320 |
| AZT91715.1 | 2.68e-107 | 4 | 319 | 6 | 329 |
| ABP67985.1 | 3.75e-106 | 4 | 319 | 12 | 335 |
| AAB87374.1 | 4.42e-106 | 4 | 319 | 17 | 340 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4L4O_A | 3.52e-102 | 4 | 320 | 13 | 336 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 2.27e-101 | 4 | 320 | 13 | 336 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 2.85e-101 | 4 | 320 | 13 | 336 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
| 5Y3X_A | 5.92e-101 | 4 | 320 | 32 | 356 | Crystalstructure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_B Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_C Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_D Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_E Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL],5Y3X_F Crystal structure of endo-1,4-beta-xylanase from Caldicellulosiruptor owensensis [Caldicellulosiruptor owensensis OL] |
| 3EMC_A | 2.07e-100 | 8 | 319 | 11 | 328 | Crystalstructure of XynB, an intracellular xylanase from Paenibacillus barcinonensis [Paenibacillus barcinonensis],3EMQ_A Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor [Paenibacillus barcinonensis],3EMZ_A Crystal structure of xylanase XynB from Paenibacillus barcinonensis complexed with a conduramine derivative [Paenibacillus barcinonensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P23556 | 8.84e-107 | 4 | 319 | 17 | 340 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1 |
| O69231 | 1.17e-99 | 8 | 319 | 12 | 329 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| P45703 | 2.46e-93 | 4 | 321 | 8 | 330 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
| Q12603 | 1.07e-86 | 4 | 319 | 35 | 350 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| Q60042 | 4.00e-71 | 4 | 319 | 366 | 686 | Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000038 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |