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CAZyme Information: MGYG000004140_00971
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1375 sp900551235 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1375; UMGS1375 sp900551235 | |||||||||||
| CAZyme ID | MGYG000004140_00971 | |||||||||||
| CAZy Family | GH110 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 80819; End: 86857 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH110 | 46 | 629 | 3.8e-168 | 0.9854014598540146 |
| CBM51 | 1283 | 1421 | 1.8e-36 | 0.9925373134328358 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 1.17e-41 | 1282 | 1422 | 2 | 136 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 4.06e-27 | 1282 | 1421 | 4 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| COG5492 | YjdB | 4.93e-18 | 1669 | 1759 | 171 | 261 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG5492 | YjdB | 3.57e-16 | 1424 | 1516 | 169 | 261 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| pfam02368 | Big_2 | 8.39e-14 | 1680 | 1757 | 1 | 77 | Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBA55548.1 | 2.39e-177 | 36 | 753 | 13 | 729 |
| AFL04872.1 | 8.62e-176 | 36 | 753 | 13 | 729 |
| QRI58269.1 | 9.72e-176 | 36 | 753 | 18 | 734 |
| BAQ98494.1 | 1.19e-175 | 36 | 753 | 13 | 729 |
| VEG17902.1 | 2.06e-175 | 36 | 753 | 36 | 752 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JW4_A | 2.75e-38 | 46 | 634 | 27 | 593 | Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta] |
| 7JWF_A | 1.17e-37 | 46 | 634 | 27 | 593 | Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta] |
| 2VMH_A | 4.05e-22 | 1280 | 1420 | 6 | 149 | Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
| 2VMG_A | 4.80e-22 | 1280 | 1420 | 12 | 155 | Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens] |
| 2VMI_A | 7.52e-22 | 1280 | 1420 | 6 | 149 | Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B1V8K7 | 5.61e-152 | 40 | 745 | 28 | 723 | Alpha-1,3-galactosidase A OS=Streptacidiphilus griseoplanus OX=66896 GN=glaA PE=1 SV=1 |
| Q826C5 | 4.11e-128 | 32 | 667 | 26 | 622 | Alpha-1,3-galactosidase A OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=glaA PE=3 SV=1 |
| Q8A2Z5 | 2.10e-81 | 64 | 617 | 29 | 540 | Alpha-1,3-galactosidase A OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaA PE=3 SV=1 |
| Q64MU6 | 2.93e-81 | 38 | 609 | 17 | 552 | Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1 |
| Q5L7M8 | 1.34e-80 | 38 | 609 | 17 | 552 | Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000528 | 0.998560 | 0.000280 | 0.000262 | 0.000183 | 0.000159 |