logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004149_01333

You are here: Home > Sequence: MGYG000004149_01333

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA5026 sp900546745
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; UBA5026; UBA5026 sp900546745
CAZyme ID MGYG000004149_01333
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1208 138717.39 5.1031
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004149 1233479 MAG United Kingdom Europe
Gene Location Start: 272;  End: 3898  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004149_01333.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 41 187 9.5e-29 0.9776119402985075
CBM32 869 980 4.9e-18 0.8064516129032258

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 3.89e-36 38 187 2 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 7.59e-17 40 187 6 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam00754 F5_F8_type_C 8.70e-15 868 981 4 119
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd14256 Dockerin_I 7.50e-12 1151 1207 2 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
cd14254 Dockerin_II 1.18e-10 1151 1206 1 53
Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCL58565.1 0.0 35 1142 77 1194
SQG16429.1 3.92e-204 36 1006 140 1107
QUQ79223.1 7.14e-204 35 1006 136 1104
QTZ56174.1 7.71e-204 36 1006 140 1107
QTZ58125.1 1.03e-203 36 1006 138 1105

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JS4_A 4.25e-13 40 187 613 752
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
2VMH_A 1.29e-11 46 187 10 150
Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
2VMG_A 1.49e-11 46 187 16 156
Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens]
2VMI_A 2.39e-11 46 187 10 150
Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
2YGL_A 7.20e-09 40 167 191 330
TheX-ray crystal structure of tandem CBM51 modules of Sp3GH98, the family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 [Streptococcus pneumoniae SP3-BS71],2YGL_B The X-ray crystal structure of tandem CBM51 modules of Sp3GH98, the family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 [Streptococcus pneumoniae SP3-BS71],2YGM_A The X-Ray Crystal Structure Of Tandem Cbm51 Modules Of Sp3gh98, The Family 98 Glycoside Hydrolase From Streptococcus Pneumoniae Sp3-Bs71, In Complex With The Blood Group B Antigen [Streptococcus pneumoniae SP3-BS71],2YGM_B The X-Ray Crystal Structure Of Tandem Cbm51 Modules Of Sp3gh98, The Family 98 Glycoside Hydrolase From Streptococcus Pneumoniae Sp3-Bs71, In Complex With The Blood Group B Antigen [Streptococcus pneumoniae SP3-BS71]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6RUF5 1.72e-06 40 186 43 202
Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1
P29767 2.44e-06 875 997 66 185
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000346 0.999002 0.000182 0.000161 0.000144 0.000143

TMHMM  Annotations      download full data without filtering help

start end
7 26