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CAZyme Information: MGYG000004151_04559
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas citronellolis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas citronellolis | |||||||||||
| CAZyme ID | MGYG000004151_04559 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Alcohol dehydrogenase [acceptor] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24874; End: 26532 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 7 | 532 | 1.2e-158 | 0.9947183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2303 | BetA | 0.0 | 8 | 537 | 8 | 540 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| PRK02106 | PRK02106 | 0.0 | 8 | 531 | 6 | 532 | choline dehydrogenase; Validated |
| TIGR03970 | Rv0697 | 6.73e-73 | 9 | 531 | 2 | 487 | dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| pfam05199 | GMC_oxred_C | 1.41e-46 | 390 | 526 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 2.30e-38 | 76 | 298 | 15 | 217 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CAD2222301.1 | 2.71e-183 | 8 | 533 | 10 | 549 |
| QWC20507.1 | 3.10e-122 | 6 | 545 | 4 | 539 |
| CAB3230510.1 | 2.80e-114 | 10 | 530 | 27 | 555 |
| ANI26486.1 | 7.87e-106 | 3 | 543 | 66 | 614 |
| AWP09430.1 | 8.40e-105 | 7 | 535 | 19 | 555 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4HA6_A | 1.38e-78 | 9 | 528 | 3 | 502 | Crystalstructure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti] |
| 6YRU_AAA | 2.00e-78 | 2 | 530 | 2 | 560 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
| 7AV4_AAA | 2.06e-78 | 2 | 530 | 78 | 636 | ChainAAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
| 3T37_A | 2.17e-78 | 9 | 528 | 19 | 518 | Crystalstructure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti] |
| 6YS1_AAA | 2.80e-78 | 2 | 530 | 2 | 560 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9WWW2 | 9.78e-128 | 8 | 531 | 2 | 528 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1 |
| Q00593 | 1.04e-122 | 8 | 531 | 2 | 528 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1 |
| Q988C9 | 5.76e-118 | 1 | 538 | 1 | 541 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
| Q985M5 | 1.99e-117 | 9 | 537 | 5 | 537 | Oxygen-dependent choline dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=betA PE=3 SV=1 |
| Q6UPE0 | 2.10e-117 | 6 | 543 | 44 | 589 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999454 | 0.000594 | 0.000015 | 0.000001 | 0.000001 | 0.000001 |