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CAZyme Information: MGYG000004176_01906
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pradoshia sp001183965 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-1321; Pradoshia; Pradoshia sp001183965 | |||||||||||
| CAZyme ID | MGYG000004176_01906 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | putative peptidoglycan endopeptidase LytE | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 514; End: 1566 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 6.17e-45 | 21 | 219 | 325 | 539 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 4.84e-41 | 21 | 205 | 400 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK13914 | PRK13914 | 7.94e-41 | 16 | 349 | 17 | 481 | invasion associated endopeptidase. |
| PRK06347 | PRK06347 | 2.39e-32 | 35 | 219 | 271 | 464 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam00877 | NLPC_P60 | 2.59e-32 | 245 | 348 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QKH63463.1 | 1.34e-106 | 1 | 350 | 1 | 359 |
| BCB05878.1 | 2.81e-104 | 1 | 350 | 1 | 350 |
| QHE63380.1 | 6.02e-104 | 1 | 350 | 1 | 352 |
| QQZ11393.1 | 9.20e-104 | 28 | 350 | 4 | 332 |
| AXI11208.1 | 1.93e-103 | 12 | 350 | 8 | 347 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7CFL_A | 5.33e-12 | 236 | 349 | 17 | 137 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2K1G_A | 1.28e-11 | 234 | 349 | 7 | 123 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 4XCM_A | 5.98e-11 | 242 | 349 | 123 | 230 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 4FDY_A | 8.19e-11 | 233 | 349 | 191 | 310 | ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50] |
| 4B8V_A | 4.57e-09 | 23 | 203 | 38 | 214 | ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 3.90e-67 | 1 | 348 | 1 | 333 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O07532 | 7.03e-63 | 28 | 350 | 175 | 488 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 4.61e-59 | 28 | 343 | 89 | 407 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| Q2YVT4 | 3.01e-35 | 28 | 219 | 28 | 215 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=sle1 PE=3 SV=1 |
| Q2FJH7 | 1.55e-34 | 28 | 219 | 28 | 215 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain USA300) OX=367830 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000247 | 0.998982 | 0.000182 | 0.000198 | 0.000192 | 0.000162 |