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CAZyme Information: MGYG000004176_02313
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pradoshia sp001183965 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-1321; Pradoshia; Pradoshia sp001183965 | |||||||||||
| CAZyme ID | MGYG000004176_02313 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | putative peptidoglycan endopeptidase LytE | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 26; End: 793 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 4.38e-28 | 152 | 253 | 1 | 104 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK06347 | PRK06347 | 2.94e-27 | 7 | 113 | 325 | 450 | 1,4-beta-N-acetylmuramoylhydrolase. |
| COG0791 | Spr | 1.33e-26 | 140 | 253 | 75 | 197 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| PRK06347 | PRK06347 | 2.69e-26 | 7 | 113 | 400 | 524 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK13914 | PRK13914 | 8.93e-24 | 11 | 235 | 198 | 461 | invasion associated endopeptidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QFK71196.1 | 5.38e-121 | 1 | 255 | 14 | 258 |
| QBK79021.1 | 6.41e-85 | 1 | 253 | 14 | 272 |
| QSZ43971.1 | 6.41e-85 | 1 | 253 | 14 | 272 |
| QHC11029.1 | 6.41e-85 | 1 | 253 | 14 | 272 |
| APB81427.1 | 6.41e-85 | 1 | 253 | 14 | 272 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7CFL_A | 2.92e-19 | 140 | 253 | 14 | 135 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2K1G_A | 2.17e-13 | 152 | 253 | 18 | 121 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 4XCM_A | 5.08e-12 | 71 | 253 | 5 | 228 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 6B8C_A | 7.77e-12 | 143 | 245 | 31 | 133 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 4HPE_A | 3.41e-10 | 140 | 252 | 187 | 303 | ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 6.10e-77 | 1 | 253 | 14 | 332 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O07532 | 2.21e-64 | 8 | 253 | 234 | 485 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 1.15e-63 | 11 | 254 | 155 | 412 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| Q01837 | 1.09e-24 | 11 | 245 | 194 | 514 | Probable endopeptidase p60 OS=Listeria ivanovii OX=1638 GN=iap PE=3 SV=1 |
| Q01835 | 4.91e-24 | 11 | 251 | 173 | 507 | Probable endopeptidase p60 OS=Listeria grayi OX=1641 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.879021 | 0.120148 | 0.000196 | 0.000396 | 0.000108 | 0.000169 |