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CAZyme Information: MGYG000004185_02076

You are here: Home > Sequence: MGYG000004185_02076

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900553815
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900553815
CAZyme ID MGYG000004185_02076
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
515 58417.31 8.59
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004185 3289740 MAG United Kingdom Europe
Gene Location Start: 49253;  End: 50800  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004185_02076.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 228 493 1e-34 0.7446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02188 PLN02188 1.15e-05 201 488 76 344
polygalacturonase/glycoside hydrolase family protein
pfam00295 Glyco_hydro_28 9.48e-05 237 464 51 238
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 3.82e-04 217 367 200 339
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHW00379.1 3.86e-114 141 513 97 476
QBN20516.1 1.26e-35 78 480 38 425
BCJ31624.1 4.03e-33 86 511 110 530
BCJ34220.1 5.54e-33 86 511 111 531
SCE65761.1 2.92e-31 86 511 104 528

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999926 0.000083 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004185_02076.