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CAZyme Information: MGYG000004203_00340

You are here: Home > Sequence: MGYG000004203_00340

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Acetatifactor;
CAZyme ID MGYG000004203_00340
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
703 76766.11 4.2537
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004203 2860639 MAG United Kingdom Europe
Gene Location Start: 90750;  End: 92861  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004203_00340.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 477 687 1.1e-52 0.8354978354978355

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 1.45e-68 470 690 17 224
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
pfam00182 Glyco_hydro_19 8.50e-43 489 689 40 231
Chitinase class I.
pfam16403 DUF5011 1.98e-13 194 249 7 60
Domain of unknown function (DUF5011). This small family of proteins is functionally uncharacterized. This family is found in Bacteroides, Prevotella, and Parabateroides. Proteins in this family are around 230 amino acids in length.
cd12215 ChiC_BD 6.16e-13 104 142 3 42
Chitin-binding domain of chitinase C. Chitin-binding domain of chitinase C (ChiC) of Streptomyces griseus and related proteins. Chitinase C is a family 19 chitinase, and consists of a N-terminal chitin binding domain and a C-terminal chitin-catalytic domain that effects degradation. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. ChiC contains the characteristic chitin-binding aromatic residues.
cd12215 ChiC_BD 8.25e-13 29 70 2 42
Chitin-binding domain of chitinase C. Chitin-binding domain of chitinase C (ChiC) of Streptomyces griseus and related proteins. Chitinase C is a family 19 chitinase, and consists of a N-terminal chitin binding domain and a C-terminal chitin-catalytic domain that effects degradation. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. ChiC contains the characteristic chitin-binding aromatic residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX42311.1 1.14e-231 271 698 39 464
AJS59770.1 3.52e-91 98 696 47 549
SYX81768.1 4.64e-85 349 696 202 547
QTH43440.1 1.44e-78 332 696 51 418
QTH45557.1 3.63e-78 348 696 66 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V91_A 1.47e-32 486 677 41 224
ChainA, GH19 Chitinase [Ficus microcarpa],7V91_B Chain B, GH19 Chitinase [Ficus microcarpa],7V91_C Chain C, GH19 Chitinase [Ficus microcarpa],7V91_D Chain D, GH19 Chitinase [Ficus microcarpa]
3CQL_A 4.85e-32 486 696 41 242
CrystalStructure of GH family 19 chitinase from Carica papaya [Carica papaya],3CQL_B Crystal Structure of GH family 19 chitinase from Carica papaya [Carica papaya]
7V92_A 9.47e-32 486 674 41 228
ChainA, GH19 Chitinase [Ficus microcarpa],7V92_B Chain B, GH19 Chitinase [Ficus microcarpa],7V92_C Chain C, GH19 Chitinase [Ficus microcarpa],7V92_D Chain D, GH19 Chitinase [Ficus microcarpa]
1DXJ_A 5.63e-31 452 677 6 222
Structureof the chitinase from jack bean [Canavalia ensiformis]
6LNR_A 9.93e-31 488 696 95 292
Structureof intact chitinase with hevein domain from the plant Simarouba glauca, known for its traditional anti-inflammatory efficacy [Simarouba glauca]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q688M5 2.46e-33 452 680 90 311
Chitinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht9 PE=2 SV=1
Q05537 9.41e-33 452 696 9 245
Basic endochitinase (Fragment) OS=Solanum lycopersicum OX=4081 GN=CHI14 PE=2 SV=1
Q05538 1.42e-31 469 696 95 313
Basic 30 kDa endochitinase OS=Solanum lycopersicum OX=4081 GN=CHI9 PE=1 SV=1
P86473 1.42e-31 486 696 112 313
Endochitinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04863 PE=1 SV=2
P93680 3.87e-31 486 696 114 315
Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000237 0.999117 0.000161 0.000177 0.000156 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004203_00340.