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CAZyme Information: MGYG000004207_00048

You are here: Home > Sequence: MGYG000004207_00048

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA6398 sp003150315
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; UBA6398; UBA6398 sp003150315
CAZyme ID MGYG000004207_00048
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
525 MGYG000004207_1|CGC1 58697.97 7.8866
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004207 2302618 MAG United Kingdom Europe
Gene Location Start: 59903;  End: 61480  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004207_00048.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 211 506 4.5e-26 0.7384615384615385

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.31e-06 261 367 246 345
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.10e-04 200 507 39 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63342.1 4.53e-142 40 502 42 503
BCI63341.1 6.06e-142 47 512 273 737
QNK57052.1 8.83e-78 60 524 41 487
QMV67078.1 4.03e-72 48 523 42 492
QNK57056.1 5.60e-70 44 525 30 494

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001205 0.997588 0.000623 0.000194 0.000187 0.000172

TMHMM  Annotations      download full data without filtering help

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