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CAZyme Information: MGYG000004253_01036

You are here: Home > Sequence: MGYG000004253_01036

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Desulfovibrio piger_A
Lineage Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio piger_A
CAZyme ID MGYG000004253_01036
CAZy Family GT4
CAZyme Description Alginate biosynthesis protein AlgA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 51747.92 5.5008
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004253 2386728 MAG China Asia
Gene Location Start: 7893;  End: 9308  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004253_01036.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR01479 GMP_PMI 0.0 3 470 1 468
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK15460 cpsB 1.44e-180 1 470 4 477
mannose-1-phosphate guanyltransferase; Provisional
COG0836 CpsB 3.32e-154 2 334 1 333
Mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis].
cd02509 GDP-M1P_Guanylyltransferase 1.37e-128 3 279 1 274
GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.
pfam01050 MannoseP_isomer 1.62e-69 316 466 1 151
Mannose-6-phosphate isomerase. All of the members of this Pfam entry belong to family 2 of the mannose-6-phosphate isomerases. The type II phosphomannose isomerases are bifunctional enzymes. This Pfam entry covers the isomerase domain. The guanosine diphospho-D-mannose pyrophosphorylase domain is in another Pfam entry, see pfam00483.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGN91810.2 1.64e-136 3 469 2 472
ACC75758.1 2.35e-50 5 319 34 360
BCF92878.1 2.72e-49 1 318 27 341
AFM26073.1 1.95e-26 363 470 342 449
AKB78728.1 3.46e-26 334 470 316 445

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2QH5_A 4.47e-61 1 301 3 299
Crystalstructure of mannose-6-phosphate isomerase from Helicobacter pylori [Helicobacter pylori 26695],2QH5_B Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori [Helicobacter pylori 26695]
2CU2_A 2.22e-53 1 351 1 336
Crystalstructure of mannose-1-phosphate geranyltransferase from Thermus thermophilus HB8 [Thermus thermophilus HB8]
2X5S_A 5.27e-48 6 348 5 332
Crystalstructure of T. maritima GDP-mannose pyrophosphorylase in apo state. [Thermotoga maritima MSB8],2X5S_B Crystal structure of T. maritima GDP-mannose pyrophosphorylase in apo state. [Thermotoga maritima MSB8],2X5Z_A Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with GDP-mannose. [Thermotoga maritima MSB8],2X5Z_B Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with GDP-mannose. [Thermotoga maritima MSB8],2X60_A Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with GTP. [Thermotoga maritima MSB8],2X60_B Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with GTP. [Thermotoga maritima MSB8],2X65_A Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with mannose-1-phosphate. [Thermotoga maritima MSB8],2X65_B Crystal structure of T. maritima GDP-mannose pyrophosphorylase in complex with mannose-1-phosphate. [Thermotoga maritima MSB8]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0RVK6 1.79e-163 3 470 4 466
Xanthan biosynthesis protein XanB OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=xanB PE=3 SV=1
P0C7J3 1.45e-162 3 470 4 466
Xanthan biosynthesis protein XanB OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=xanB PE=3 SV=1
Q8X7P1 1.04e-157 2 470 5 477
Mannose-1-phosphate guanylyltransferase 1 OS=Escherichia coli O157:H7 OX=83334 GN=manC1 PE=1 SV=1
P24174 2.08e-157 2 470 5 477
Mannose-1-phosphate guanylyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=manC PE=3 SV=3
P26340 5.87e-155 2 470 7 479
Mannose-1-phosphate guanylyltransferase ManC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=manC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004253_01036.