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CAZyme Information: MGYG000004275_00297
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_C sp000437175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp000437175 | |||||||||||
| CAZyme ID | MGYG000004275_00297 | |||||||||||
| CAZy Family | CBM79 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 14133; End: 18110 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM79 | 239 | 348 | 4.6e-31 | 0.9818181818181818 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam18522 | DUF5620 | 8.22e-29 | 241 | 350 | 1 | 119 | Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module. |
| pfam18244 | CttA_N | 1.37e-07 | 1138 | 1202 | 1 | 70 | Cellulose-binding protein CttA N-terminal domain. This is the N-terminal domain of cellulose-binding protein CttA present in Ruminococcus flavefaciens. CttA mediates attachment of the bacterial substrate via two carbohydrate-binding modules. The domain is known as the X-module and lacks a true hydrophobic core. Unlike the X-modules in other types of CohE-XDoc complexes it does not contribute to the binding surface. This X-module appears to serve as an extended spacer, which separates the cellulose-binding modules at the N terminus of CttA and the bacterial cell wall. The domain does not share structural similarity with other known X-modules from cellulolytic bacteria but does show similarity to G5-1 module of StrH from S. pneumoniae. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CDE12955.1 | 0.0 | 1 | 1325 | 1 | 1318 |
| ERJ93725.1 | 7.71e-87 | 1 | 1324 | 69 | 1541 |
| CDF00679.1 | 4.90e-25 | 246 | 352 | 162 | 268 |
| ERJ89368.1 | 1.41e-23 | 246 | 352 | 91 | 198 |
| CDE32079.1 | 2.30e-14 | 246 | 356 | 191 | 303 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4V1L_A | 2.80e-16 | 239 | 349 | 18 | 129 | Highresolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1],4V1L_B High resolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1],4V1L_C High resolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1] |
| 4D3L_A | 1.32e-15 | 239 | 349 | 18 | 129 | SeMetstructure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4D3L_B SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4D3L_C SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4V1K_A SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000333 | 0.998867 | 0.000194 | 0.000221 | 0.000178 | 0.000152 |
