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CAZyme Information: MGYG000004284_01109

You are here: Home > Sequence: MGYG000004284_01109

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900541475
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900541475
CAZyme ID MGYG000004284_01109
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
856 MGYG000004284_27|CGC1 93933.07 4.4231
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004284 1988853 MAG China Asia
Gene Location Start: 5193;  End: 7763  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004284_01109.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 19 849 4.2e-64 0.9635922330097088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.92e-05 287 623 490 796
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 1 856 1 855
AZH68834.1 0.0 4 851 13 863
QNM10672.1 2.29e-292 4 849 13 832
AGF57028.1 1.26e-239 4 849 12 845
AZS14314.1 2.66e-193 6 849 14 872

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQM_A 7.67e-06 682 856 907 1105
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 7.67e-06 682 856 907 1105
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004284_01109.