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CAZyme Information: MGYG000004334_01025

You are here: Home > Sequence: MGYG000004334_01025

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_E sp002493635
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E sp002493635
CAZyme ID MGYG000004334_01025
CAZy Family GH24
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
793 MGYG000004334_13|CGC1 85865.78 9.7094
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004334 2103818 MAG Israel Asia
Gene Location Start: 14194;  End: 16575  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.17

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH24 538 639 5.4e-16 0.708029197080292

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3103 YgiM 8.75e-15 8 169 3 150
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
cd00737 lyz_endolysin_autolysin 1.44e-13 542 641 2 94
endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
COG3103 YgiM 9.51e-11 103 255 21 150
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
pfam08239 SH3_3 1.65e-09 667 718 3 52
Bacterial SH3 domain.
smart00287 SH3b 1.56e-08 106 163 1 56
Bacterial SH3 domain homologues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPJ85428.1 1.33e-18 33 263 109 331
BAD02898.1 2.73e-18 48 264 575 780
QNM43054.1 3.64e-18 48 253 727 916
AST96696.1 3.64e-18 48 253 727 916
BAD65631.1 3.66e-18 48 264 443 648

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2KQ8_A 2.43e-06 196 256 6 62
ChainA, Cell wall hydrolase [[Bacillus thuringiensis] serovar konkukian]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.455199 0.541101 0.002498 0.000410 0.000276 0.000502

TMHMM  Annotations      download full data without filtering help

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